09. May 2025

Bacterium Produces “Organic Dishwashing Liquid” to Degrade Oil Bacterium Produces “Organic Dishwashing Liquid” to Degrade Oil

A study led by the University of Bonn has illuminated the mechanism by which this marine creature produces the detergent

The marine bacterium Alcanivorax borkumensis feeds on oil, multiplying rapidly in the wake of oil spills, and thereby accelerating the elimination of the pollution, in many cases. It does this by producing an “organic dishwashing liquid” which it uses to attach itself to oil droplets. Researchers from the University of Bonn, RWTH Aachen University, Heinrich Heine University Düsseldorf and research center Forschungszentrum Jülich have now discovered the mechanism by which this “organic dishwashing liquid” is synthesized. Published in the prominent international journal Nature Chemical Biology, the research findings could allow the breeding of more efficient strains of oil-degrading bacteria.

The red-marked bacteria with the gene cluster switched off - were no longer able to synthesize the detergent. The bacteria were then unable to attach to the surface of oil droplets (left) the way they usually do (right).
The red-marked bacteria with the gene cluster switched off - were no longer able to synthesize the detergent. The bacteria were then unable to attach to the surface of oil droplets (left) the way they usually do (right). © Dr. Dörmann Workgroup, Uni Bonn
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Loosely translated into English, the Latin name of the bacterium is “alkane eaters from Borkum.” Indeed, the name says it all, for alkanes are chains of hydrocarbons that exist in petroleum in large quantities. A. borkumensis feeds on energy-rich chains which occur naturally in the sea—and on non-naturally-occurring chains like those dispersed in oil spills. In many cases the bacteria multiply rapidly, thereby accelerating the pollution-clearing process.

Oil and water don’t mix

Because of the well-known fact that oil and water don’t mix, in order to eat its favorite food, the microscopic sea creature requires a chemical aid. It makes it for itself, producing a kind of natural dishwashing liquid. This “detergent” is a compound consisting of the amino acid glycine and a sugar-fatty acid compound. “The molecules have a water-soluble part and a fat-soluble part,” explains Professor Peter Dörmann, who is a biochemist at the University of Bonn's IMBIO institute (Institute of Molecular Physiology and Biotechnology of Plants). “The bacteria settle on the surface of the oil droplets, where they form a biofilm.”

The mechanism by which the alkane eater synthesizes this detergent was not understood until a working group led by Professor Karl-Erich Jaeger of Forschungszentrum Jülich and the Heinrich Heine University Düsseldorf intensively studied the...

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The authors thank the Microscopy Core Facility of the Medical Faculty at the University of Bonn for providing support and instrumentation

Cui J., Fassl M., Vasanthakumaran V., Dierig M.M., Hölzl G., Karmainski T., Tiso T., Kubicki S., Thies S., Blank L.M., Jaeger K.-E., Peter Dörmann (2025) Biosurfactant biosynthesis by Alcanivorax borkumensis and its role in oil biodegradation. Nat. Chem. Biol.
DOI: 10.1038/s41589-025-01908-1
https://www.nature.com/articles/s41589-025-01908-1

Prof. Dr. Peter Dörmann
Institute of Molecular Physiology and Biotechnology of Plants (IMBIO)
University of Bonn
Phone: +49 228 73-2830 
Email: doermann@uni-bonn.de

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